After creating a new Jenkins site in Jira a full sync is made. The sync finds all jenkins jobs, but most of the jobs (251 of 263) are marked as deleted in the Jira Jobs Database Table and shown as inactive in the Jira Jenkins Site view.
This issue looks like but I don't see any pattern which jobs are marked or not marked as deleted. For example there are two jenkins jobs "XCore - Web" and "XCore - Core". One is ok and one is marked as deleted.
current version of jira and plugin